npj Biodiversity
2026
ネイチャーポジティブファイナンスにおける生態系サービス評価のフロンティアとしての微生物多様性
Microbial diversity as the next frontier of payments for ecosystem services in nature-positive finance
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FEATURED RESEARCH
注目の研究
International Journal of Gastronomy and Food Science
2025
味噌の細菌叢を決定づける原材料と製造環境の影響
Raw materials and manufacturing environment as determinants of miso bacterial community
RESEARCH
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論文一覧
2026
EcoEvoRxiv
PREPRINT
Gastronomy meets nature positive through the conservation of invisible microbial terroirKohei Ito, Hiroshi Honda
EcoEvoRxiv, 2026
npj Biodiversity
PERSPECTIVE
Microbial diversity as the next frontier of payments for ecosystem services in nature-positive financeKohei Ito, Honami Ando, Hiroshi Honda
npj Biodiversity, 2026
bioRxiv
PREPRINT
Soil Microbial Diversity of the Imperial Palace Outer Gardens, TokyoHonami Ando, Runa Furuya, Kohei Ito
bioRxiv, 2026
Authorea
PREPRINT
NAR Genomics and Bioinformatics
RESEARCH
CAMP: a modular metagenomics analysis system for integrated multistep data explorationLauren Mak, Braden Tierney, Wei Wei, et al.
NAR Genomics and Bioinformatics 8(1), 2026
データ提供者として参加
2025
Microbiology
RESEARCH
Comparative genomic analysis of Latilactobacillus sakei strains provides new insights into their association with different niche adaptationsKohei Ito, Yutaro Ito
Microbiology 171(7), 2025
International Journal of Gastronomy and Food Science
RESEARCH
Raw materials and manufacturing environment as determinants of miso bacterial communityKohei Ito, Marin Yamaguchi
International Journal of Gastronomy and Food Science, 101222, 2025
Journal of Genomics
RESEARCH
From Soil to Surface: Exploring the Impact of Green Infrastructure on Microbial Communities in the Built EnvironmentMalin Mcgonigal, Kohei Ito
Journal of Genomics 13, 10–23, 2025
2024
bioRxiv
PREPRINT
Mother-to-infant plasmid transmission in early postpartum and its association with dominant gut bacteriaYuki Kuriyama, Natsuki Suganuma, Kohei Ito
bioRxiv, 2024
Frontiers in Veterinary Science
RESEARCH
Comparative analysis based on shared amplicon sequence variants reveals that cohabitation influences gut microbiota sharing between humans and dogsYutaro Ito, Miho Nagasawa, Kahori Koyama, Kohei Ito, Takefumi Kikusui
Frontiers in Veterinary Science 11, 2024
Current Microbiology
RESEARCH
The Similarities in Microbial and Chemical Patterns of Fermentation in Two Open Environments were Promoted by Using 150-Year-Old Nukadoko as StartersMarin Yamaguchi, Kota Imai, Dominique Chen, Young ah Seong, Kazuhiro Jo, Kohei Ito
Current Microbiology 81(8), 2024
bioRxiv
PREPRINT
Bioinformatic evaluation of the potential oral-gut translocation of periodontal pathogens in patients with colorectal polypsNaoki Takahashi, Marin Yamaguchi, Keisuke Sato, et al.
bioRxiv, 2024
2023
Bioscience, Biotechnology, and Biochemistry
REVIEW
Understanding the quality and safety of food production through the lens of The Microbiome of The Built EnvironmentKota Imai, Ryo Niwa, Masaki Fujioka, Kohei Ito
Bioscience, Biotechnology, and Biochemistry 88(3), 254–259
FEMS Microbiology Letters
RESEARCH
Direct contact of fermented rice bran beds promotes food-to-hand transmission of lactic acid bacteriaRyo Niwa, Dominique Chen, Young ah Seong, Kazuhiro Jo, Kohei Ito
FEMS Microbiology Letters, 2023
bioRxiv
PREPRINT
Bacterial composition changes in canine plaque over periodontal disease severity and daily care practicesAyano Watanabe, Junichi Okada, Ryo Niwa, Yukiko Inui, Kohei Ito, Yutaka Shimokawa, Miho Kihira
bioRxiv, 2023
PLOS ONE
RESEARCH
Philodulcilactobacillus myokoensis gen. nov., sp. nov., a fructophilic, acidophilic, and agar-phobic lactic acid bacterium isolated from fermented vegetable extractsTomoaki Kouya, Yohei Ishiyama, Shota Ohashi, Ryota Kumakubo, Takeshi Yamazaki, Toshiki Otaki
PLOS ONE 18(6), e0286677, 2023
解析担当として参加
Journal of Bioscience and Bioengineering
RESEARCH
A unique case in which Kimoto-style fermentation was completed with Leuconostoc as the dominant genus without transitioning to LactobacillusKohei Ito, Ryo Niwa, Yuta Yamagishi, Ken Kobayashi, Yuji Tsuchida, Genki Hoshino, Tomoyuki Nakagawa, Takashi Watanabe
Journal of Bioscience and Bioengineering 135(6), 451–457, 2023
Frontiers in Microbiology
RESEARCH
A dark matter in sake brewing: Origin of microbes producing a Kimoto-style fermentation starterKohei Ito, Ryo Niwa, Ken Kobayashi, Tomoyuki Nakagawa, Genki Hoshino, Yuji Tsuchida
Frontiers in Microbiology 14, 2023
Indoor Environment
REVIEW
Understanding the Characteristics of the Microbiomes of the Built Environment and their Effects on the Human BodyKohei Ito
Indoor Environment 26(1), 29–42, 2023
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